STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX1330Conserved hypothetical protein. (261 aa)    
Predicted Functional Partners:
idhA
Putative myo-inositol 2-dehydrogenase.
  
  
 0.682
RCIX176
Conserved hypothetical protein.
  
     0.660
pfkB-2
Putative ATP-dependent phosphofructokinase (PFK-B family); Belongs to the carbohydrate kinase PfkB family.
 
  
 0.589
pfkB-1
Putative ATP-dependent phosphofructokinase (PFK-B family).
 
  
 0.532
fbaA
Fructose-bisphosphate aldolase (class II).
  
  
 0.456
pfkB-3
Putative ATP-dependent phosphofructokinase (PFK-B family).
  
  
 0.429
gabD
Succinate-semialdehyde dehydrogenase.
  
  
 0.424
RCIX1328
Putative glycosyltransferase (group 1).
     
 0.419
RCIX1975
Putative corrinoid activation/regeneration protein.
  
    0.412
RCIX1329
Hypothetical protein.
       0.408
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.