Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rfbA-3Glucose-1-phosphate thymidylyltransferase. (400 aa)    
Predicted Functional Partners:
pgm-2
Phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family.
 
 0.990
rfbA-4
Glucose-1-phosphate thymidylyltransferase.
 
  
 
0.988
pgm-1
Phosphoglucomutase/phosphomannomutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 0.971
glmS
Glutamine-fructose-6-phosphate amidotransferase,isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
   
 0.958
rfbB-3
dTDP-glucose 4,6-dehydratase; Identical to orf2 of fosmid clone 3D10mr4 gene synonyms: rmlB, cpsN.
 
 0.941
galE-2
Putative UDP-glucose 4-epimerase.
 
 0.941
rfbB-2
Putative dTDP-glucose 4-6-dehydratase.
  
 0.937
rfbB-1
dTDP-glucose 4,6-dehydratase.
  
 
 0.933
rfbA-2
Putative glucose-1-phosphate thymidylyltransferase.
  
  
 
0.916
rfbA-1
Glucose-1-phosphate thymidylyltransferase.
 
  
0.908
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.