Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gluPABC-type glutamate import system, permease component. (440 aa)    
Predicted Functional Partners:
gluQ
ABC-type glutamate import system, ATP-binding protein.
 0.999
gluH
ABC-type glutamate import system, periplasmic component.
 
 0.997
RCIX1001
Putative ABC-type transport system, permease component (ABC-3 family).
 
 
 0.628
RCIX1775
ABC-type transport system, ATPase component.
 
  0.560
LRC377
Putative ABC-type peptide transport system,periplasmic component.
  
 
 0.511
LRC578
Putative ABC-type cobalt transport system, ATPase component.
 
  0.495
RRC394
Predicted transporter (DMT superfamily).
 
  
 0.474
RRC395
Predicted transporter (DMT superfamily).
 
  
 0.470
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.464
paaJ
acetyl-CoA C-acetyltransferase (thiolase I).
  
  
 0.462
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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