STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX1452Putative membrane-bound metal-dependent hydrolase. (188 aa)    
Predicted Functional Partners:
RCIX242
Conserved hypothetical protein.
  
     0.572
RCIX1491
Conserved hypothetical protein.
  
     0.569
RCIX1946
Conserved hypothetical protein.
  
     0.535
RCIX168
Conserved hypothetical protein.
  
     0.527
RCIX1955
Putative oligosaccharide repeat unit transporter; Simmilar to orf3 of fosmid clone 4B7mr3.
  
     0.477
RCIX251
Oligosaccharide repeat unit transporter.
  
     0.472
RCIX1235
Conserved hypothetical protein.
  
     0.470
RCIX1472
Putative oligosaccharide repeat unit transporter.
  
     0.467
RCIX1939
Putative oligosaccharide repeat unit transporter; Similar to orf3 of fosmid clone 4B7mr3.
  
     0.467
RCIX2643
Conserved hypothetical protein.
  
     0.464
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.