Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX1565Predicted ABC-type sulfonate transport system,periplasmic component. (309 aa)    
Predicted Functional Partners:
ssuC
Putative ABC-type sulfonate import system,permease component.
 
 
 0.988
ssuB
Putative ABC-type sulfonate import system, ATPase component.
 
 
 0.987
nifl-2
Nitrogen regulator (P-II family).
 
 
 
 0.721
nifl-1
Nitrogen regulator (P-II family).
 
 
 
 0.702
RCIX1567
ThiS/MoaD sulfur transfer protein.
 
   
 0.700
RRC433
Putative nitrogen regulator (P-II family); Belongs to the P(II) protein family.
   
 
 0.654
RCIX1564
Putative Fe-S cluster assembly protein (NifU-like).
     
 0.631
RCIX1566
ThiF/MoeB sulfur transfer protein.
  
  
 0.618
iscS
Class V aminotransferase (NifS-like); Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
     
 0.588
RCIX449
Conserved hypothetical protein.
       0.554
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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