Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cdhA | cdhB | LRC456 | LRC458 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | 0.999 |
| cdhA | fdhA-1 | LRC456 | RCIX1628 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | Formate dehydrogenase, alpha subunit. | 0.914 |
| cdhA | fdhA-2 | LRC456 | RCIX2373 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | Formate dehydrogenase, alpha subunit. | 0.914 |
| cdhA | fdhA-3 | LRC456 | RCIX2378 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | Formate dehydrogenase, alpha subunit. | 0.914 |
| cdhA | fdhA-4 | LRC456 | RRC251 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | Formate dehydrogenase, alpha subunit. | 0.914 |
| cdhA | fdhB-1 | LRC456 | RCIX1630 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | Formate dehydrogenase, beta subunit. | 0.927 |
| cdhA | fwdD-1 | LRC456 | RCIX598 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | Tungsten formylmethanofuran dehydrogenase,subunit D. | 0.886 |
| cdhA | fwdD-2 | LRC456 | RRC260 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | Tungsten formylmethanofuran dehydrogenase,subunit D. | 0.887 |
| cdhA | fwdF-1 | LRC456 | RCIX592 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | Tungsten formylmethanofuran dehydrogenase,subunit F. | 0.781 |
| cdhB | cdhA | LRC458 | LRC456 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | 0.999 |
| cdhB | fdhA-1 | LRC458 | RCIX1628 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | Formate dehydrogenase, alpha subunit. | 0.901 |
| cdhB | fdhA-2 | LRC458 | RCIX2373 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | Formate dehydrogenase, alpha subunit. | 0.901 |
| cdhB | fdhA-3 | LRC458 | RCIX2378 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | Formate dehydrogenase, alpha subunit. | 0.901 |
| cdhB | fdhA-4 | LRC458 | RRC251 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | Formate dehydrogenase, alpha subunit. | 0.901 |
| cdhB | fdhB-1 | LRC458 | RCIX1630 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | Formate dehydrogenase, beta subunit. | 0.915 |
| cdhB | fwdD-1 | LRC458 | RCIX598 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | Tungsten formylmethanofuran dehydrogenase,subunit D. | 0.866 |
| cdhB | fwdD-2 | LRC458 | RRC260 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | Tungsten formylmethanofuran dehydrogenase,subunit D. | 0.868 |
| cdhB | fwdF-1 | LRC458 | RCIX592 | Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. | Tungsten formylmethanofuran dehydrogenase,subunit F. | 0.789 |
| fdh | fdhA-1 | RCIX2285 | RCIX1628 | NAD-dependent formaldehyde dehydrogenase. | Formate dehydrogenase, alpha subunit. | 0.910 |
| fdh | fdhA-2 | RCIX2285 | RCIX2373 | NAD-dependent formaldehyde dehydrogenase. | Formate dehydrogenase, alpha subunit. | 0.910 |
page 1 of 6