STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mopIMolybdopterin-binding protein. (67 aa)    
Predicted Functional Partners:
modA
ABC-type molybdenum import system, periplasmic component.
 
  
 0.780
cheC
Chemotaxis MCP methylation-inhibitor.
    
   0.746
RCIX2603
Predicted chemotaxis protein (CheW/CheC-like).
    
   0.746
sulP
Putative sulfate permease.
     
 0.617
RCIX1634
Hypothetical protein.
       0.527
moaB
Molybdopterin biosynthesis protein B.
   
 
 0.505
fmdE
Putative molybdenum formylmethanofuran dehydrogenase, subunit E.
       0.465
moeA-5
Putative molybdopterin biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
     
 0.460
ssuB
Putative ABC-type sulfonate import system, ATPase component.
  
  
 0.449
LRC334
ABC-type transport system, permease component.
     
 0.436
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.