STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fmdEPutative molybdenum formylmethanofuran dehydrogenase, subunit E. (212 aa)    
Predicted Functional Partners:
ftr
Formylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
     
 0.914
fdh
NAD-dependent formaldehyde dehydrogenase.
     
  0.900
fdhB-4
Formate dehydrogenase, beta subunit.
  
 
 0.804
fdhB-1
Formate dehydrogenase, beta subunit.
  
 
 0.802
fdhB-2
Formate dehydrogenase, beta subunit.
  
 
 0.792
fdhB-3
Formate dehydrogenase, beta subunit.
  
 
 0.775
fdhA-1
Formate dehydrogenase, alpha subunit.
  
 
 0.756
fdhA-2
Formate dehydrogenase, alpha subunit.
  
 
 0.756
fdhA-3
Formate dehydrogenase, alpha subunit.
  
 
 0.756
fdhA-4
Formate dehydrogenase, alpha subunit.
  
 
 0.756
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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