STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsBArsenite efflux transporter. (350 aa)    
Predicted Functional Partners:
RCIX1649
Putative serine/threonine protein phosphatase.
       0.746
RRC291
Predicted NADPH-dependent FMN reductase.
     
 0.624
RCIX1653
Conserved hypothetical protein.
  
  
 0.588
RCIX1655
Putative transcription regulator (ArsR family).
  
  
 0.465
hisA-2
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
     
 0.463
gap
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.438
RCIX1654
Glutaredoxin-like protein; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro.
     
 0.415
LRC591
Hypothetical protein.
  
  
 0.412
gloA
Putative lactoylglutathione lyase.
  
  
 0.412
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.