Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX1655Putative transcription regulator (ArsR family). (114 aa)    
Predicted Functional Partners:
RCIX1654
Glutaredoxin-like protein; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro.
 
   
 0.680
RCIX1653
Conserved hypothetical protein.
 
  
 0.631
LRC61
Predicted protease (Mov34 family).
       0.470
arsB
Arsenite efflux transporter.
  
  
 0.441
RCIX1656
Putative signal transduction histidine kinase.
       0.433
RCIX888
Conserved hypothetical protein.
       0.430
LRC567
Putative transcription regulator (ArsR family).
  
     0.416
RRC475
Putative transporter (arsenical pump membrane protein family).
 
  
 0.401
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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