STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX1667Hypothetical protein. (588 aa)    
Predicted Functional Partners:
RCIX1671
Conserved hypothetical protein.
 
     0.933
RCIX1665
Hypothetical protein.
 
     0.919
RCIX1658
Hypothetical protein.
 
     0.913
RCIX1675
Putative bacteriophage protein.
 
     0.842
RCIX1676
Hypothetical protein.
 
     0.813
RCIX1661
Hypothetical protein.
       0.779
RCIX1662
Hypothetical protein.
       0.779
RCIX1663
Hypothetical protein.
       0.773
RCIX1668
Hypothetical protein.
       0.773
RCIX1673
Conserved hypothetical protein.
 
     0.747
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.