STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX1700Conserved hypothetical protein. (172 aa)    
Predicted Functional Partners:
cheC
Chemotaxis MCP methylation-inhibitor.
    
   0.577
RCIX2603
Predicted chemotaxis protein (CheW/CheC-like).
    
   0.577
RCIX1087
Conserved hypothetical protein.
  
  
 0.575
RCIX1676
Hypothetical protein.
  
    0.464
RCIX1658
Hypothetical protein.
  
     0.461
RCIX1229
Predicted flavodoxin.
  
     0.457
RCIX307
Predicted flavodoxin.
 
     0.444
RRC479
Hypothetical protein.
 
   0.431
hcp
Prismane protein (hybrid cluster protein); Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
       0.426
RCIX890
Conserved hypothetical protein; Conserved in archaea.
  
  
 0.423
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.