Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX1739Putative transcription regulator (AsnC/Lrp family). (162 aa)    
Predicted Functional Partners:
aat-2
Putative aspartate aminotransferase.
 
   
 0.983
rps8e
30S ribosomal protein S8E.
       0.692
RRC465
Conserved hypothetical protein.
   
 
 0.632
cdc6-1
Cell division cycle protein 6; Involved in regulation of DNA replication.
       0.622
hpyA1
Putative archaeal histone A1 (H4 family).
     
 0.536
RCIX2247
Putative transcription regulator (AsnC/Lrp family).
  
     0.455
aat-1
Putative aspartate aminotransferase.
 
   
 0.440
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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