Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX1755Fe-S cluster-binding oxidoreductase component (HdrD-like). (352 aa)    
Predicted Functional Partners:
glcD-1
(S)-2-hydroxy-acid dehydrogenase.
  
 0.981
RCIX1757
Conserved hypothetical protein.
       0.922
fumB
Fumarate hydratase (fumarase), beta subunit.
    
 0.919
glcD-2
Putative (S)-2-hydroxy-acid dehydrogenase.
  
 0.912
fumA
Fumarate hydratase (fumarase), alpha subunit.
    
 0.907
RCIX1759
Hypothetical protein.
       0.505
LRC43
Predicted glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.476
hdrB-1
Putative heterodisulfide reductase, subunit B.
 
 
 
 0.462
tgt-1
Archaeosine tRNA-ribosyltransferase.
       0.451
RCIX1753
Putative signal transduction histidine kinase.
       0.426
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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