Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCIX134 | RCIX1817 | RCIX134 | RCIX1817 | Conserved hypothetical protein. | Conserved hypothetical protein (MiaB/NifB-like). | 0.539 |
RCIX134 | RCIX1819 | RCIX134 | RCIX1819 | Conserved hypothetical protein. | Hypothetical protein. | 0.704 |
RCIX1501 | RCIX1817 | RCIX1501 | RCIX1817 | Hypothetical protein. | Conserved hypothetical protein (MiaB/NifB-like). | 0.413 |
RCIX1501 | RRC213 | RCIX1501 | RRC213 | Hypothetical protein. | Hypothetical protein. | 0.490 |
RCIX1817 | RCIX134 | RCIX1817 | RCIX134 | Conserved hypothetical protein (MiaB/NifB-like). | Conserved hypothetical protein. | 0.539 |
RCIX1817 | RCIX1501 | RCIX1817 | RCIX1501 | Conserved hypothetical protein (MiaB/NifB-like). | Hypothetical protein. | 0.413 |
RCIX1817 | RCIX1819 | RCIX1817 | RCIX1819 | Conserved hypothetical protein (MiaB/NifB-like). | Hypothetical protein. | 0.933 |
RCIX1817 | RCIX1821 | RCIX1817 | RCIX1821 | Conserved hypothetical protein (MiaB/NifB-like). | Hypothetical protein. | 0.705 |
RCIX1817 | RCIX1822 | RCIX1817 | RCIX1822 | Conserved hypothetical protein (MiaB/NifB-like). | Predicted phosphatidate cytidylyltransferase. | 0.588 |
RCIX1817 | RCIX207 | RCIX1817 | RCIX207 | Conserved hypothetical protein (MiaB/NifB-like). | Predicted Fe-S cluster-binding oxidoreductase. | 0.543 |
RCIX1817 | RRC213 | RCIX1817 | RRC213 | Conserved hypothetical protein (MiaB/NifB-like). | Hypothetical protein. | 0.420 |
RCIX1817 | cysG | RCIX1817 | RCIX915 | Conserved hypothetical protein (MiaB/NifB-like). | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.442 |
RCIX1817 | purM | RCIX1817 | RCIX1823 | Conserved hypothetical protein (MiaB/NifB-like). | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.472 |
RCIX1819 | RCIX134 | RCIX1819 | RCIX134 | Hypothetical protein. | Conserved hypothetical protein. | 0.704 |
RCIX1819 | RCIX1817 | RCIX1819 | RCIX1817 | Hypothetical protein. | Conserved hypothetical protein (MiaB/NifB-like). | 0.933 |
RCIX1819 | RCIX1821 | RCIX1819 | RCIX1821 | Hypothetical protein. | Hypothetical protein. | 0.705 |
RCIX1819 | RCIX1822 | RCIX1819 | RCIX1822 | Hypothetical protein. | Predicted phosphatidate cytidylyltransferase. | 0.588 |
RCIX1819 | purM | RCIX1819 | RCIX1823 | Hypothetical protein. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.453 |
RCIX1821 | RCIX1817 | RCIX1821 | RCIX1817 | Hypothetical protein. | Conserved hypothetical protein (MiaB/NifB-like). | 0.705 |
RCIX1821 | RCIX1819 | RCIX1821 | RCIX1819 | Hypothetical protein. | Hypothetical protein. | 0.705 |
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