STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX1843Conserved hypothetical protein. (247 aa)    
Predicted Functional Partners:
RCIX1844
Conserved hypothetical protein.
       0.809
moeA-5
Putative molybdopterin biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
       0.690
RCIX1845
Conserved hypothetical protein.
 
     0.611
RRC4
Putative aminotransferase.
 
    0.565
cobD
Putative L-threonine-O-3-phosphate decarboxylase.
 
  
 0.554
RCIX2511
Hypothetical protein.
  
  
 0.539
hisC
Histidinol-phosphate aminotransferase.
 
  
 0.532
rfbB-1
dTDP-glucose 4,6-dehydratase.
  
    0.518
RRC405
Conserved hypothetical protein.
 
  
 0.518
RCIX1087
Conserved hypothetical protein.
  
    0.509
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.