echE protein (Methanocella arvoryzae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

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Score

echE

Ech hydrogenase, subunit E. (359 aa)

Predicted Functional Partners:

echC

0.999

echB

0.993

RCIX2382

0.986

echF

0.983

RCIX483

0.979

echA

0.929

echD

0.910

RCIX482

0.910

RCIX2384

0.900

RCIX2387

0.900

Your Current Organism:

Methanocella arvoryzae

NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RCIX2382	RCIX2384	RCIX2382	RCIX2384	Hydrogenase, small subunit-like protein (HycG-like).	Hydrogenase, membrane subunit 1-like protein (EchA-like).	0.989
RCIX2382	RCIX2387	RCIX2382	RCIX2387	Hydrogenase, small subunit-like protein (HycG-like).	Hydrogenase, membrane subunit 4-like protein (HycC-like).	0.988
RCIX2382	RCIX482	RCIX2382	RCIX482	Hydrogenase, small subunit-like protein (HycG-like).	Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like).	0.919
RCIX2382	echA	RCIX2382	RCIX1882	Hydrogenase, small subunit-like protein (HycG-like).	Ech hydrogenase, subunit A.	0.548
RCIX2382	echB	RCIX2382	RCIX1883	Hydrogenase, small subunit-like protein (HycG-like).	Ech hydrogenase, subunit B.	0.970
RCIX2382	echD	RCIX2382	RCIX1886	Hydrogenase, small subunit-like protein (HycG-like).	Ech hydrogenase, subunit D.	0.437
RCIX2382	echE	RCIX2382	RCIX1887	Hydrogenase, small subunit-like protein (HycG-like).	Ech hydrogenase, subunit E.	0.986
RCIX2382	echF	RCIX2382	RCIX1888	Hydrogenase, small subunit-like protein (HycG-like).	Ech hydrogenase, subunit F.	0.923
RCIX2384	RCIX2382	RCIX2384	RCIX2382	Hydrogenase, membrane subunit 1-like protein (EchA-like).	Hydrogenase, small subunit-like protein (HycG-like).	0.989
RCIX2384	RCIX2387	RCIX2384	RCIX2387	Hydrogenase, membrane subunit 1-like protein (EchA-like).	Hydrogenase, membrane subunit 4-like protein (HycC-like).	0.825
RCIX2384	RCIX482	RCIX2384	RCIX482	Hydrogenase, membrane subunit 1-like protein (EchA-like).	Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like).	0.870
RCIX2384	RCIX483	RCIX2384	RCIX483	Hydrogenase, membrane subunit 1-like protein (EchA-like).	[NiFe]-hydrogenase, small subunit (EchC-like).	0.911
RCIX2384	echA	RCIX2384	RCIX1882	Hydrogenase, membrane subunit 1-like protein (EchA-like).	Ech hydrogenase, subunit A.	0.951
RCIX2384	echB	RCIX2384	RCIX1883	Hydrogenase, membrane subunit 1-like protein (EchA-like).	Ech hydrogenase, subunit B.	0.938
RCIX2384	echC	RCIX2384	RCIX1884	Hydrogenase, membrane subunit 1-like protein (EchA-like).	Ech hydrogenase, subunit C.	0.908
RCIX2384	echD	RCIX2384	RCIX1886	Hydrogenase, membrane subunit 1-like protein (EchA-like).	Ech hydrogenase, subunit D.	0.770
RCIX2384	echE	RCIX2384	RCIX1887	Hydrogenase, membrane subunit 1-like protein (EchA-like).	Ech hydrogenase, subunit E.	0.900
RCIX2384	echF	RCIX2384	RCIX1888	Hydrogenase, membrane subunit 1-like protein (EchA-like).	Ech hydrogenase, subunit F.	0.870
RCIX2387	RCIX2382	RCIX2387	RCIX2382	Hydrogenase, membrane subunit 4-like protein (HycC-like).	Hydrogenase, small subunit-like protein (HycG-like).	0.988
RCIX2387	RCIX2384	RCIX2387	RCIX2384	Hydrogenase, membrane subunit 4-like protein (HycC-like).	Hydrogenase, membrane subunit 1-like protein (EchA-like).	0.825

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