Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX195Glycosyltransferase (group 1). (386 aa)    
Predicted Functional Partners:
RCIX192
Glucosyltransferase (family 2).
 
  
 0.935
RCIX196
Glucosyltransferase (family 2).
 
  
 0.797
RCIX1465
Glycosyltransferase (group 1).
 
   
 0.603
RCIX2087
Putative glycosyltransferase (group 1).
 
     0.598
rfbB-3
dTDP-glucose 4,6-dehydratase; Identical to orf2 of fosmid clone 3D10mr4 gene synonyms: rmlB, cpsN.
  
  
 0.509
ugd
UDP-glucose 6-dehydrogenase.
 
  
 0.507
RCIX2732
Putative glycosyltransferase (family 2).
 
  
 0.492
RCIX363
Putative sugar-phosphate adenylyltransferase.
 
 
 0.484
LRC550
Putative lipopolysaccharide biosynthesis protein.
 
  
 0.483
RCIX1246
Putative glycosyltransferase (family 2).
 
  
 0.474
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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