Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX1975Putative corrinoid activation/regeneration protein. (552 aa)    
Predicted Functional Partners:
mtaC
Methanol:cobalamin methyltransferase, subunit C.
 
  
 0.903
mtaB
Methanol:cobalamin methyltransferase, subunit B.
 
     0.893
RCIX1976
Signal transduction serine/threonine kinase.
       0.773
RRC508
Conserved hypothetical protein.
  
     0.489
LRC374
Conserved hypothetical protein.
  
     0.477
RCIX2723
Conserved hypothetical protein.
  
     0.461
mtxX
Putative methyltransferase mtx subunit X.
  
     0.460
RCIX1972
Hypothetical protein.
       0.449
RCIX1330
Conserved hypothetical protein.
  
    0.418
RCIX2194
Conserved hypothetical protein.
  
     0.412
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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