Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX2180ABC-type transport system, ATPase component. (640 aa)    
Predicted Functional Partners:
RCIX1174
Putative acetoin utilization protein (histone deacetylase superfamily).
  
 0.885
dnaK
Chaperonin Hsp70; Acts as a chaperone.
 
 0.849
RCIX1862
Conserved GTP-binding protein (Ras family).
   
 0.841
RCIX2249
ATPase (AAA superfamily); Belongs to the AAA ATPase family.
 
 
 0.824
pstB
High-affinity phosphate ABC-type import system,ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
    
0.823
aif2
Translation initiation factor 2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
 
 
 
 0.786
gap
Glyceraldehyde-3-phosphate dehydrogenase.
 
 
 
 0.756
cdc48-3
Cell division cycle protein 48.
   
 0.748
cdc48-1
Putative cell division cycle protein 48.
   
 0.748
cdc48-2
Cell division cycle protein 48.
   
 0.748
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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