STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX2197Sulfite reductase, assimilatory. (223 aa)    
Predicted Functional Partners:
rub
Putative rubredoxin; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
  
 
 0.936
fdx2-1
2Fe-2S Rieske-type ferredoxin.
 
 
 0.933
ndh
Putative NADH dehydrogenase.
   
 0.932
fdx2-2
2Fe-2S Rieske-type ferredoxin.
 
 
 0.932
fdx2-3
2Fe-2S Rieske-type ferredoxin.
  
 
 0.921
cysG
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 0.667
RCIX2198
Hypothetical protein.
       0.521
RCIX909
Putative bifunctional precorrin-2 oxidase/ferrochelatase.
 
  
 0.492
RRC49
Putative iron-containing alcohol dehydrogenase.
  
  
 0.491
fdhC
Putative formate transporter.
 
  
 0.482
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.