STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhNAD-dependent formaldehyde dehydrogenase. (397 aa)    
Predicted Functional Partners:
fdhB-1
Formate dehydrogenase, beta subunit.
  
 
 0.921
fdhB-2
Formate dehydrogenase, beta subunit.
  
 
 0.921
fdhB-3
Formate dehydrogenase, beta subunit.
  
 
 0.921
fdhB-4
Formate dehydrogenase, beta subunit.
  
 
 0.921
fdhA-1
Formate dehydrogenase, alpha subunit.
    
 0.910
fdhA-2
Formate dehydrogenase, alpha subunit.
    
 0.910
fdhA-3
Formate dehydrogenase, alpha subunit.
    
 0.910
fdhA-4
Formate dehydrogenase, alpha subunit.
    
 0.910
fae-hps
Formaldehyde activating hexulose-6-phosphate synthase; Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin; In the C-terminal section; belongs to the HPS/KGPDC family. HPS subfamily.
    
 0.909
fwdG-1
Tungsten formylmethanofuran dehydrogenase,subunit G.
     
  0.900
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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