rpoF protein (Methanocella arvoryzae) - STRING interaction network

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Score

rpoF

DNA-directed RNA polymerase, subunit F. (116 aa)

Predicted Functional Partners:

rpoL

0.972

rpoP

0.970

rpoB1

0.967

rpl21e

0.967

rpoE

0.958

rpoB2

0.955

rpoK

0.953

rpoA2

0.951

rpoA1

0.950

rpoD

0.946

Your Current Organism:

Methanocella arvoryzae

NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl21e	rpoD	RCIX2349	RCIX2583	50S ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family.	DNA-directed RNA polymerase, subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.643
rpl21e	rpoF	RCIX2349	RCIX2350	50S ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family.	DNA-directed RNA polymerase, subunit F.	0.967
rpl21e	rpoK	RCIX2349	LRC403	50S ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family.	DNA-directed RNA polymerase, subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.	0.698
rpl21e	rpoL	RCIX2349	LRC270	50S ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family.	DNA-directed RNA polymerase, subunit L; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family.	0.679
rpl21e	rpoP	RCIX2349	RCIX2127	50S ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family.	DNA-directed RNA polymerase, subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family.	0.781
rpoA1	rpoA2	LRC357	LRC358	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit A2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA1	rpoB1	LRC357	LRC354	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit B1; Belongs to the RNA polymerase beta chain family.	0.999
rpoA1	rpoB2	LRC357	LRC356	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit B2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA1	rpoD	LRC357	RCIX2583	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
rpoA1	rpoE	LRC357	RCIX2017	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit E.	0.982
rpoA1	rpoF	LRC357	RCIX2350	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit F.	0.950
rpoA1	rpoK	LRC357	LRC403	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.	0.991
rpoA1	rpoL	LRC357	LRC270	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit L; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family.	0.983
rpoA1	rpoP	LRC357	RCIX2127	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family.	0.976
rpoA2	rpoA1	LRC358	LRC357	DNA-directed RNA polymerase, subunit A2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit A1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA2	rpoB1	LRC358	LRC354	DNA-directed RNA polymerase, subunit A2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit B1; Belongs to the RNA polymerase beta chain family.	0.999
rpoA2	rpoB2	LRC358	LRC356	DNA-directed RNA polymerase, subunit A2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit B2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA2	rpoD	LRC358	RCIX2583	DNA-directed RNA polymerase, subunit A2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
rpoA2	rpoE	LRC358	RCIX2017	DNA-directed RNA polymerase, subunit A2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit E.	0.987
rpoA2	rpoF	LRC358	RCIX2350	DNA-directed RNA polymerase, subunit A2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit F.	0.951

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