Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RCIX2446Predicted membrane protease subunit (stomatin family). (372 aa)    
Predicted Functional Partners:
RCIX2447
Hypothetical protein.
 
 
 0.991
RCIX1862
Conserved GTP-binding protein (Ras family).
   
 0.882
pyk
Pyruvate kinase (pyruvate phosphotransferase); Identical to orf1 of fosmid clone 3D10mr4; Belongs to the pyruvate kinase family.
  
 
 0.839
dnaK
Chaperonin Hsp70; Acts as a chaperone.
  
 0.803
RCIX1707
Conserved hypothetical protein.
  
 0.791
lonB
ATP-dependent protease La; Belongs to the peptidase S16 family.
  
 
 0.734
aqpM
Putative aquaporin.
 
 
 0.703
echD
Ech hydrogenase, subunit D.
   
 
 0.694
RCIX2180
ABC-type transport system, ATPase component.
 
 
 
 0.694
RCIX1174
Putative acetoin utilization protein (histone deacetylase superfamily).
   
 
 0.647
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.