STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX2470Glutaredoxin-like protein. (92 aa)    
Predicted Functional Partners:
RCIX2472
Predicted redox-active protein (CxxC motives).
 
  
 0.933
msrA
Peptide methionine sulfoxide reductase, domain A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.868
RRC295
Predicted ferredoxin:thioredoxin reductase subunit.
 
  
 0.617
RCIX2473
Hypothetical protein.
       0.583
RCIX2469
Hypothetical protein.
       0.526
RCIX652
HesB family protein.
  
  
 0.484
RCIX2738
Putative metallo-beta-lactamase.
 
  
 0.441
RCIX2467
Predicted peptidase (M48 family).
  
  
 0.438
RCIX1574
Putative Fe-S cluster assembly protein (SufC-like).
 
  
 0.436
dut
Putative dUTP pyrophosphatase.
 
  
 0.430
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.