Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LRC129 | RCIX1603 | LRC129 | RCIX1603 | Predicted methyltransferase (UbiE/COQ5 family). | Predicted SAM-dependent methyltransferase. | 0.441 |
LRC129 | RCIX2493 | LRC129 | RCIX2493 | Predicted methyltransferase (UbiE/COQ5 family). | Conserved hypothetical protein. | 0.587 |
LRC129 | RCIX580 | LRC129 | RCIX580 | Predicted methyltransferase (UbiE/COQ5 family). | Putative methyltransferase (UbiE/COQ5 family). | 0.535 |
LRC129 | ubiE | LRC129 | RCIX854 | Predicted methyltransferase (UbiE/COQ5 family). | Ubiquinone/menaquinone biosynthesis methyltransferase. | 0.426 |
RCIX1603 | LRC129 | RCIX1603 | LRC129 | Predicted SAM-dependent methyltransferase. | Predicted methyltransferase (UbiE/COQ5 family). | 0.441 |
RCIX1603 | RCIX2493 | RCIX1603 | RCIX2493 | Predicted SAM-dependent methyltransferase. | Conserved hypothetical protein. | 0.629 |
RCIX1603 | RCIX580 | RCIX1603 | RCIX580 | Predicted SAM-dependent methyltransferase. | Putative methyltransferase (UbiE/COQ5 family). | 0.530 |
RCIX2493 | LRC129 | RCIX2493 | LRC129 | Conserved hypothetical protein. | Predicted methyltransferase (UbiE/COQ5 family). | 0.587 |
RCIX2493 | RCIX1603 | RCIX2493 | RCIX1603 | Conserved hypothetical protein. | Predicted SAM-dependent methyltransferase. | 0.629 |
RCIX2493 | RCIX2496 | RCIX2493 | RCIX2496 | Conserved hypothetical protein. | Hypothetical protein. | 0.506 |
RCIX2493 | RCIX2497 | RCIX2493 | RCIX2497 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.413 |
RCIX2493 | RCIX580 | RCIX2493 | RCIX580 | Conserved hypothetical protein. | Putative methyltransferase (UbiE/COQ5 family). | 0.512 |
RCIX2493 | alsD | RCIX2493 | RCIX2494 | Conserved hypothetical protein. | Alpha-acetolactate decarboxylase. | 0.701 |
RCIX2493 | codA | RCIX2493 | RCIX2492 | Conserved hypothetical protein. | Putative cytosine deaminase. | 0.576 |
RCIX2493 | ubiE | RCIX2493 | RCIX854 | Conserved hypothetical protein. | Ubiquinone/menaquinone biosynthesis methyltransferase. | 0.457 |
RCIX2496 | RCIX2493 | RCIX2496 | RCIX2493 | Hypothetical protein. | Conserved hypothetical protein. | 0.506 |
RCIX2496 | RCIX2497 | RCIX2496 | RCIX2497 | Hypothetical protein. | Conserved hypothetical protein. | 0.488 |
RCIX2496 | alsD | RCIX2496 | RCIX2494 | Hypothetical protein. | Alpha-acetolactate decarboxylase. | 0.553 |
RCIX2497 | RCIX2493 | RCIX2497 | RCIX2493 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.413 |
RCIX2497 | RCIX2496 | RCIX2497 | RCIX2496 | Conserved hypothetical protein. | Hypothetical protein. | 0.488 |
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