STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
iorA-2Putative indolepyruvate:ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (532 aa)    
Predicted Functional Partners:
iorB
Indolepyruvate:ferredoxin oxidoreductase, beta subunit.
 
 0.896
RCIA194
Hypothetical protein.
       0.686
porC-2
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
 
 
 0.629
porC-1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
  
 
 0.581
LRC11
Conserved hypothetical amino acid-binding protein.
 
    0.527
sat
Sulfate adenylyltransferase (sulfurylase).
  
  
 0.500
RCIX2650
Conserved hypothetical protein.
       0.494
aor-1
Tungsten-containing aldehyde:ferredoxin oxidoreductase.
  
  
 0.402
aor-2
Putative tungsten-containing aldehyde:ferredoxin oxidoreductase.
  
  
 0.402
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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