STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX267Putative alkaline serine protease; Belongs to the peptidase S8 family. (795 aa)    
Predicted Functional Partners:
RCIX1761
Predicted regulator of chromosome condensation.
 
 0.730
RCIX450
Putative pheromone shutdown protein (TraB family).
   
 
 0.723
LRC128
Predicted regulator of chromosome condensation.
  
 
 0.694
LRC300
Hypothetical protein; Identical to orf11 of fosmid clone 3D10mr4.
  
 
 0.694
RCIX1335
Predicted regulator of chromosome condensation.
 
 
 0.694
RCIX1585
Predicted regulator of chromosome condensation.
  
 
 0.694
RCIX492
Predicted regulator of chromosome condensation.
  
 
 0.694
RCIX807
Predicted regulator of chromosome condensation; Similar to RCIX819.
 
 
 0.694
RCIX819
Predicted regulator of chromosome condensation; Similar to RCIX807.
  
 
 0.694
RCIX265
Hypothetical protein.
       0.541
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.