Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX2732Putative glycosyltransferase (family 2). (234 aa)    
Predicted Functional Partners:
rnb
Putative exoribonuclease II.
       0.521
RCIX1976
Signal transduction serine/threonine kinase.
  
 
 0.518
LRC548
Putative glycosyltransferase (family 2).
 
  
 0.510
RCIX195
Glycosyltransferase (group 1).
 
  
 0.492
RCIX1921
Aminotransferase (DegT family); Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.476
RCIX1878
Putative glycosyltransferase (group 1).
 
  
 0.471
LRC551
Putative glycosyltransferase (group 1).
 
  
 0.439
RCIX1261
Glycosyltransferase (group 1).
 
  
 0.430
RCIX2730
Hypothetical protein.
       0.422
LRC544
Glycosyltransferase (group 1).
 
  
 0.413
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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