STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX280Conserved hypothetical protein; Belongs to the UPF0146 family. (138 aa)    
Predicted Functional Partners:
mcrD-2
Methyl-coenzyme M reductase operon protein D.
  
     0.639
mcrD-1
Methyl-coenzyme M reductase, operon protein D.
  
     0.623
RCIX281
Predicted acetyltransferase (GNAT family).
       0.606
RCIX1982
Hypothetical protein.
  
     0.597
RCIA13
Hypothetical protein.
       0.551
RCIX2003
Conserved hypothetical nitrogenase-related protein.
  
     0.547
RCIX1746
Conserved hypothetical protein.
  
     0.546
LRC167
Conserved hypothetical protein; Belongs to the UPF0288 family.
  
     0.532
LRC298
Hypothetical protein; Identical to orf9 of fosmid clone 3D10mr4.
  
     0.531
RCIX2215
Conserved hypothetical protein.
  
     0.528
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.