Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RCIX281 | rpl13p | RCIX281 | LRC406 | Predicted acetyltransferase (GNAT family). | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.664 |
| RCIX281 | rpl18p | RCIX281 | RCIX2565 | Predicted acetyltransferase (GNAT family). | 50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.690 |
| RCIX281 | rpl23p | RCIX281 | RCIX2543 | Predicted acetyltransferase (GNAT family). | 50S ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.757 |
| RCIX281 | rpl29p | RCIX281 | RCIX2549 | Predicted acetyltransferase (GNAT family). | 50S ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.653 |
| RCIX281 | rpl30e | RCIX281 | LRC359 | Predicted acetyltransferase (GNAT family). | 50S ribosomal protein L30E; Belongs to the eukaryotic ribosomal protein eL30 family. | 0.643 |
| RCIX281 | rpl31e | RCIX281 | RCIX1043 | Predicted acetyltransferase (GNAT family). | 50S ribosomal protein L31E; Belongs to the eukaryotic ribosomal protein eL31 family. | 0.643 |
| RCIX281 | rpl32e | RCIX281 | RCIX2563 | Predicted acetyltransferase (GNAT family). | Putative 50S ribosomal protein L32E. | 0.676 |
| RCIX281 | rpl3p | RCIX281 | RCIX2540 | Predicted acetyltransferase (GNAT family). | 50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.682 |
| RCIX281 | rpl7ae | RCIX281 | LRC145 | Predicted acetyltransferase (GNAT family). | 50S ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.636 |
| RCIX281 | rplX | RCIX281 | RCIX1041 | Predicted acetyltransferase (GNAT family). | 50S ribosomal protein LX. | 0.630 |
| rpl13p | RCIX281 | LRC406 | RCIX281 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Predicted acetyltransferase (GNAT family). | 0.664 |
| rpl13p | rpl18p | LRC406 | RCIX2565 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
| rpl13p | rpl23p | LRC406 | RCIX2543 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| rpl13p | rpl29p | LRC406 | RCIX2549 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
| rpl13p | rpl30e | LRC406 | LRC359 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L30E; Belongs to the eukaryotic ribosomal protein eL30 family. | 0.999 |
| rpl13p | rpl31e | LRC406 | RCIX1043 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L31E; Belongs to the eukaryotic ribosomal protein eL31 family. | 0.999 |
| rpl13p | rpl32e | LRC406 | RCIX2563 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Putative 50S ribosomal protein L32E. | 0.999 |
| rpl13p | rpl3p | LRC406 | RCIX2540 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
| rpl13p | rpl7ae | LRC406 | LRC145 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.999 |
| rpl13p | rplX | LRC406 | RCIX1041 | 50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein LX. | 0.999 |
page 1 of 6