Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tnp-6Transposase (IS4). (530 aa)    
Predicted Functional Partners:
tnp-14
Transposase (IS4).
  
     0.673
tnp-23
Transposase (IS4).
  
     0.667
tnp-16
Transposase (IS4).
  
     0.666
tnp-5
Transposase (IS4).
  
     0.665
tnp-27
Transposase (IS4).
  
     0.661
RCIX1000
Predicted ABC-type transport system, periplasmic component.
  
     0.568
RRC218
Putative acetyltransferase (GNAT family).
  
     0.534
LRC72
Conserved hypothetical protein.
  
     0.470
RCIX355
Similarities to hypothetical protein of haloarcula.
       0.455
RCIX347
Similarities to hypothetical protein of haloarcula.
       0.452
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.