STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuBPutative ABC-type sulfonate import system, ATPase component. (256 aa)    
Predicted Functional Partners:
ssuC
Putative ABC-type sulfonate import system,permease component.
  
 0.999
ssuA
Putative ABC-type sulfonate import system,periplasmic component.
 
  
 0.979
RCIX1565
Predicted ABC-type sulfonate transport system,periplasmic component.
 
  
 0.872
RCIX1298
Predicted ABC-type transport system, permease component.
     0.811
RCIX1296
Predicted ABC-type transport system, permease component.
     0.744
RCIX782
ABC-type transport system, ATPase component.
   
0.744
modB
ABC-type molybdenum import system, permease component.
  
 0.688
mer
N(5),N(10)-methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
 
  
 0.588
fgd-1
Coenzyme F420-dependent glucose-6-phosphate dehydrogenase.
 
  
 0.571
RCIX449
Conserved hypothetical protein.
 
     0.570
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.