Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX472Conserved hypothetical protein; Putative regulator of Ras-like GTPase activity,member of the Roadblock/LC7/MglB family. (115 aa)    
Predicted Functional Partners:
RCIX894
Putative GTP-binding protein (Ras GTPase family).
 
 
 0.983
RCIX293
Conserved hypothetical protein.
 
 
 0.933
mvhG-1
Coenzyme F420-non-reducing hydrogenase (methyl viologen-reducing hydrogenase), gamma subunit.
 
     0.841
mvhA-1
Coenzyme F420-non-reducing hydrogenase (methyl viologen-reducing hydrogenase), alpha subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
     0.815
RCIX475
Conserved hypothetical protein.
       0.801
RCIX471
Hypothetical protein; Similarities to predicted regulator of Ras-like GTPase activity, member of the Roadblock/LC7/MglB family.
       0.760
RCIX470
Hypothetical protein.
       0.751
RCIX468
Putative chromosome partitioning ATPase (MinD family).
 
    0.701
RCIX469
Hypothetical protein.
       0.694
fdx3-2
2(4Fe-4S) ferredoxin.
 
     0.689
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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