STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (290 aa)    
Predicted Functional Partners:
ilvD-2
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 0.990
ilvD-1
Dihydroxy-acid dehydratase.
  
 0.990
leuA-2
2-isopropylmalate synthase.
 
 0.975
thrA
Homoserine dehydrogenase; Gene synonyms: hom, metL.
 
 
 0.935
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 
 0.901
porA-1
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
  
 
 0.835
porA-2
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
  
 
 0.835
ilvB
Acetolactate synthase, large subunit.
  
 
 0.831
pdc
Putative pyruvate decarboxylase; Similar to other TPP enzymes, such as pyruvate oxidase (Pox)(EC 1.2.3.3) and pyruvate dehydrogenase (Pdh) (EC 1.2.2.2).
  
 
 0.829
porB-1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
    
 0.825
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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