STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX602Hypothetical protein. (137 aa)    
Predicted Functional Partners:
RCIX603
Conserved hypothetical protein.
     
 0.675
fwdA-1
Tungsten formylmethanofuran dehydrogenase,subunit A.
       0.644
fwdC-1
Tungsten formylmethanofuran dehydrogenase,subunit C.
       0.644
fwdB-1
Tungsten formylmethanofuran dehydrogenase,subunit B.
       0.631
fwdD-1
Tungsten formylmethanofuran dehydrogenase,subunit D.
       0.547
mvhD-1
Coenzyme F420-non-reducing hydrogenase (methyl viologen-reducing hydrogenase), delta subunit.
       0.508
hdrA-2
Heterodisulfide reductase, subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
       0.505
fwdF-1
Tungsten formylmethanofuran dehydrogenase,subunit F.
       0.498
hdrC-2
Heterodisulfide reductase, subunit C.
       0.498
hdrB-2
Heterodisulfide reductase, subunit B.
       0.498
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.