Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX664ABC-type transport system, permease component. (232 aa)    
Predicted Functional Partners:
LRC334
ABC-type transport system, permease component.
 
  
 0.988
RCIX666
ABC-type transport system, ATPase component.
 
  
 0.988
aor-1
Tungsten-containing aldehyde:ferredoxin oxidoreductase.
 
   
 0.682
aor-2
Putative tungsten-containing aldehyde:ferredoxin oxidoreductase.
 
   
 0.682
RCIX2133
ABC-type transport system, ATPase component.
       0.622
moeA-1
Molybdopterin biosynthesis protein A.
 
     0.598
moeA-2
Molybdopterin biosynthesis protein A.
 
     0.527
modA
ABC-type molybdenum import system, periplasmic component.
 
   
 0.523
RCIX663
Conserved hypothetical protein.
       0.501
pstB
High-affinity phosphate ABC-type import system,ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
   
 0.434
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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