STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX664ABC-type transport system, permease component. (232 aa)    
Predicted Functional Partners:
RCIX666
ABC-type transport system, ATPase component.
  
 0.976
LRC334
ABC-type transport system, permease component.
 
  
 0.972
aor-1
Tungsten-containing aldehyde:ferredoxin oxidoreductase.
 
   
 0.680
aor-2
Putative tungsten-containing aldehyde:ferredoxin oxidoreductase.
 
   
 0.680
moeA-1
Molybdopterin biosynthesis protein A.
 
   
 0.609
moeA-2
Molybdopterin biosynthesis protein A.
 
   
 0.539
RCIX663
Conserved hypothetical protein.
       0.534
modA
ABC-type molybdenum import system, periplasmic component.
 
   
 0.500
pstS
High-affinity phosphate ABC-type import system,periplasmic component.
 
  
 0.448
mopI
Molybdopterin-binding protein.
     
 0.430
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.