STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrdGAnaerobic ribonucleoside-triphosphate reductase (glycyl-dependent) activating enzyme. (262 aa)    
Predicted Functional Partners:
nrdD
Anaerobic ribonucleoside-triphosphate reductase (glycyl-dependent).
 
  
 0.950
RRC49
Putative iron-containing alcohol dehydrogenase.
 
  
 0.700
gabD
Succinate-semialdehyde dehydrogenase.
  
  
 0.501
feoB
Fe(II) import system, GTP-binding protein B.
 
   
 0.479
RCIX2197
Sulfite reductase, assimilatory.
  
  
 0.418
RCIX2692
Sulfite reductase, assimilatory.
  
  
 0.418
RCIX1564
Putative Fe-S cluster assembly protein (NifU-like).
 
  
 0.417
fdhC
Putative formate transporter.
 
   
 0.405
pdhB
Pyruvate dehydrogenase complex E1, transketolase beta subunit.
   
  
 0.405
pdhC
Pyruvate dehydrogenase complex E2,dihydrolipoamide acetyltransferase.
   
  
 0.404
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.