Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX946Putative nucleotidyltransferase. (383 aa)    
Predicted Functional Partners:
RRC97
Conserved hypothetical protein.
 
 
 
 0.803
RCIX950
Conserved hypothetical protein.
 
     0.784
gsp-8
Putative bacterial type II secretion system protein.
 
   
 0.736
RRC521
Hypothetical protein.
   
 
 0.724
aif2
Translation initiation factor 2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
 
 
   0.667
RCIX948
Intracellular protease (C56 family).
       0.593
RCIX947
Putative phosphoribosyltransferase.
       0.587
RCIX944
Hypothetical protein.
     
 0.522
RCIX943
Conserved hypothetical protein.
       0.513
RCIX587
Conserved hypothetical protein.
  
     0.473
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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