STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCIX981Putative signal transduction protein. (693 aa)    
Predicted Functional Partners:
RCIX980
Putative signal transduction histidine kinase.
   
 0.940
RCIX443
Putative response regulator (CheY-like).
 
 
0.885
pdhC
Pyruvate dehydrogenase complex E2,dihydrolipoamide acetyltransferase.
    
 0.826
RCIX982
Putative hydrolase (alpha/beta fold family).
  
 
 0.771
RCIX1890
Putative response regulator.
 
 
 0.751
LRC339
Putative signal transduction histidine kinase.
 
   
 0.750
LRC135
Predicted signal transduction histidine kinase.
   
 0.749
RCIX1713
Putative signal transduction histidine kinase.
     0.749
RCIX420
Predicted signal transduction histidine kinase,fragment 2.
 
   
 0.749
RCIX156
Predicted signal transduction histidine kinase.
 
   
 0.746
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.