Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCIX981Putative signal transduction protein. (693 aa)    
Predicted Functional Partners:
RCIX980
Putative signal transduction histidine kinase.
 
   
 0.939
RCIX443
Putative response regulator (CheY-like).
  
 
 0.758
RCIX982
Putative hydrolase (alpha/beta fold family).
   
 
 0.753
LRC339
Putative signal transduction histidine kinase.
  
   
 0.750
RCIX420
Predicted signal transduction histidine kinase,fragment 2.
 
   
 0.749
LRC135
Predicted signal transduction histidine kinase.
 
   
 0.748
RCIX1713
Putative signal transduction histidine kinase.
 
     0.748
RCIX156
Predicted signal transduction histidine kinase.
  
   
 0.746
RCIX160
Predicted signal transduction histidine kinase.
  
   
 0.746
RCIX2191
Putative signal transduction histidine kinase.
  
   
 0.746
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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