Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LRC61 | RRC480 | LRC61 | RRC480 | Predicted protease (Mov34 family). | Putative trypsin-like protease. | 0.692 |
| LRC61 | pan-1 | LRC61 | RCIX1184 | Predicted protease (Mov34 family). | 26S proteasome regulatory subunit (proteasome-activating nucleotidase); Belongs to the AAA ATPase family. | 0.952 |
| LRC61 | pan-2 | LRC61 | RCIX2455 | Predicted protease (Mov34 family). | 26s proteasome, regulatory subunit (proteasome-activating nucleotidase); ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, where [...] | 0.952 |
| LRC61 | rps12p | LRC61 | LRC361 | Predicted protease (Mov34 family). | 30S ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.915 |
| LRC61 | rps13p | LRC61 | RCIX2580 | Predicted protease (Mov34 family). | Putative 30S ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.918 |
| LRC61 | rps9p | LRC61 | LRC405 | Predicted protease (Mov34 family). | 30S ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.928 |
| RCIX2106 | RRC480 | RCIX2106 | RRC480 | Conserved hypothetical protein. | Putative trypsin-like protease. | 0.743 |
| RRC480 | LRC61 | RRC480 | LRC61 | Putative trypsin-like protease. | Predicted protease (Mov34 family). | 0.692 |
| RRC480 | RCIX2106 | RRC480 | RCIX2106 | Putative trypsin-like protease. | Conserved hypothetical protein. | 0.743 |
| RRC480 | RRC67 | RRC480 | RRC67 | Putative trypsin-like protease. | Predicted protease (Mov34 family). | 0.692 |
| RRC480 | pan-1 | RRC480 | RCIX1184 | Putative trypsin-like protease. | 26S proteasome regulatory subunit (proteasome-activating nucleotidase); Belongs to the AAA ATPase family. | 0.892 |
| RRC480 | pan-2 | RRC480 | RCIX2455 | Putative trypsin-like protease. | 26s proteasome, regulatory subunit (proteasome-activating nucleotidase); ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, where [...] | 0.892 |
| RRC480 | rpl11p | RRC480 | LRC27 | Putative trypsin-like protease. | 50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. | 0.764 |
| RRC480 | rpl14p | RRC480 | RCIX2554 | Putative trypsin-like protease. | 50S ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.638 |
| RRC480 | rps12p | RRC480 | LRC361 | Putative trypsin-like protease. | 30S ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.625 |
| RRC480 | rps13p | RRC480 | RCIX2580 | Putative trypsin-like protease. | Putative 30S ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.627 |
| RRC480 | rps9p | RRC480 | LRC405 | Putative trypsin-like protease. | 30S ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.624 |
| RRC67 | RRC480 | RRC67 | RRC480 | Predicted protease (Mov34 family). | Putative trypsin-like protease. | 0.692 |
| RRC67 | pan-1 | RRC67 | RCIX1184 | Predicted protease (Mov34 family). | 26S proteasome regulatory subunit (proteasome-activating nucleotidase); Belongs to the AAA ATPase family. | 0.952 |
| RRC67 | pan-2 | RRC67 | RCIX2455 | Predicted protease (Mov34 family). | 26s proteasome, regulatory subunit (proteasome-activating nucleotidase); ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, where [...] | 0.952 |
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