THAPS_25320 protein (Thalassiosira pseudonana)

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Predicted Interactions

gene neighborhood

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textmining

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Score

THAPS_25320

Predicted protein. (467 aa)

Predicted Functional Partners:

Rpb8

0.614

B8BUI2_THAPS

0.531

RP3A

0.527

RPB5

0.526

RpbY

0.520

B8C3F5_THAPS

0.519

B8C2S7_THAPS

0.517

B8C7R3_THAPS

0.517

B8BTE9_THAPS

0.511

B8C460_THAPS

0.511

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BTE9_THAPS	B8BUI2_THAPS	B8BTE9	B8BUI2	Transcription initiation protein spt4-like protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.998
B8BTE9_THAPS	B8C2S7_THAPS	B8BTE9	B8C2S7	Transcription initiation protein spt4-like protein.	Uncharacterized protein.	0.799
B8BTE9_THAPS	B8C3F5_THAPS	B8BTE9	B8C3F5	Transcription initiation protein spt4-like protein.	Dna-directed RNA polymerase i.	0.998
B8BTE9_THAPS	B8C460_THAPS	B8BTE9	B8C460	Transcription initiation protein spt4-like protein.	19kDa subunit of RNA polymerase.	0.999
B8BTE9_THAPS	B8C7R3_THAPS	B8BTE9	B8C7R3	Transcription initiation protein spt4-like protein.	Uncharacterized protein.	0.802
B8BTE9_THAPS	RP3A	B8BTE9	B8BWN8	Transcription initiation protein spt4-like protein.	RP3A,-like protein to dna-directed RNA polymerase II third largest subunit.	0.999
B8BTE9_THAPS	RPB5	B8BTE9	B8C1Q1	Transcription initiation protein spt4-like protein.	RPB5,-like protein to RNA polymerase i.	0.998
B8BTE9_THAPS	Rpb8	B8BTE9	B8CGC8	Transcription initiation protein spt4-like protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.997
B8BTE9_THAPS	RpbY	B8BTE9	B8C993	Transcription initiation protein spt4-like protein.	Probable dna-directed RNA polymerase II 13.6 kDa polypeptide.	0.998
B8BTE9_THAPS	THAPS_25320	B8BTE9	B5YLG5	Transcription initiation protein spt4-like protein.	Predicted protein.	0.511
B8BUI2_THAPS	B8BTE9_THAPS	B8BUI2	B8BTE9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Transcription initiation protein spt4-like protein.	0.998
B8BUI2_THAPS	B8C2S7_THAPS	B8BUI2	B8C2S7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.773
B8BUI2_THAPS	B8C3F5_THAPS	B8BUI2	B8C3F5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Dna-directed RNA polymerase i.	0.999
B8BUI2_THAPS	B8C460_THAPS	B8BUI2	B8C460	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	19kDa subunit of RNA polymerase.	0.999
B8BUI2_THAPS	B8C7R3_THAPS	B8BUI2	B8C7R3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.773
B8BUI2_THAPS	RP3A	B8BUI2	B8BWN8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RP3A,-like protein to dna-directed RNA polymerase II third largest subunit.	0.999
B8BUI2_THAPS	RPB5	B8BUI2	B8C1Q1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RPB5,-like protein to RNA polymerase i.	0.999
B8BUI2_THAPS	Rpb8	B8BUI2	B8CGC8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
B8BUI2_THAPS	RpbY	B8BUI2	B8C993	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Probable dna-directed RNA polymerase II 13.6 kDa polypeptide.	0.999
B8BUI2_THAPS	THAPS_25320	B8BUI2	B5YLG5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Predicted protein.	0.531