STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPS_20268Predicted protein. (76 aa)    
Predicted Functional Partners:
CDP1
Cell differentiation protein.
   
 0.999
B8CC81_THAPS
Not1 domain-containing protein.
   
 0.999
B8CE67_THAPS
NOT2_3_5 domain-containing protein.
   
 0.999
B8BQI6_THAPS
Uncharacterized protein.
   
 0.997
B8BXU6_THAPS
Uncharacterized protein.
    
 0.996
B8BXB1_THAPS
Uncharacterized protein.
   
 0.987
THAPS_10811
Predicted protein.
   
 0.930
B8BXA5_THAPS
Uncharacterized protein.
    
 0.906
B8C3U0_THAPS
Uncharacterized protein.
   
 
 0.867
B8BW33_THAPS
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.854
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.