STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPS_6988Aspartate-tRNA ligase or aspartyl tRNA synthetase. (480 aa)    
Predicted Functional Partners:
B8CA55_THAPS
tRNA-binding domain-containing protein.
  
 0.997
B8C3R6_THAPS
Glutamyl-trna amidotransferase.
 
 
 0.966
B8BV30_THAPS
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.923
B8LCI1_THAPS
Prolyl-trna synthetase.
  
 0.921
B8BRC4_THAPS
Aspartate-trna ligase.
  
 
 
0.908
B8CBE9_THAPS
Glutamyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.883
B8LEH2_THAPS
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.872
B8CFY5_THAPS
Atp-dependent RNA helicase.
  
 0.867
B8CFY6_THAPS
Rna-helicase-like protein.
  
 0.867
B8BTF7_THAPS
GIY-YIG domain-containing protein.
   
 0.860
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.