STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPS_263205Prohibitin. (260 aa)    
Predicted Functional Partners:
B8BS69_THAPS
Prohibitin.
  
0.988
B8BX06_THAPS
14-3-3-like protein; Belongs to the 14-3-3 family.
   
 0.751
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase. Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.742
THAPS_41306
Predicted protein; Belongs to the AAA ATPase family.
  
 0.742
B8C6N5_THAPS
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.742
B8C8S9_THAPS
Ftsh-like protein; Belongs to the AAA ATPase family.
  
 0.742
B8LEX1_THAPS
Predicted protein; Belongs to the AAA ATPase family.
  
 0.735
B8BQH4_THAPS
Uncharacterized protein.
   
 
 0.713
B8BTK4_THAPS
Autophagy-related protein.
    
 
 0.688
B8C4G1_THAPS
Calreticulin-like protein.
    
 
 0.685
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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