STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPS_35360Autophagy-related protein 3. (313 aa)    
Predicted Functional Partners:
B8BTK4_THAPS
Autophagy-related protein.
  
 0.999
B8BZ94_THAPS
Ubiquitin activating enzyme e1-like protein.
   
 0.999
B8C4Q5_THAPS
Ubiquitin-like protein ATG12.
    
 0.999
B8C175_THAPS
WD40-repeat protein.
   
 0.998
B8C5Z4_THAPS
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.992
B8BWD4_THAPS
Uncharacterized protein.
     
 0.927
B8C9G4_THAPS
APG6 domain-containing protein.
   
 0.845
B8C5G7_THAPS
APG6 domain-containing protein.
   
 0.842
B8CAM6_THAPS
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.807
B8LCU5_THAPS
Phosphatidylinositol 3-kinase; Belongs to the PI3/PI4-kinase family.
    
 0.807
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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