STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPS_7140Predicted protein. (516 aa)    
Predicted Functional Partners:
B8C5X9_THAPS
TFIID_20kDa domain-containing protein.
    
 0.607
B8CEP8_THAPS
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.601
B8BTN6_THAPS
Uncharacterized protein.
    
  0.596
B8BW09_THAPS
TAF6_C domain-containing protein.
    
 0.587
THAPS_6729
Predicted protein.
    
   0.543
rpl2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
    
  0.540
B8CC21_THAPS
PI3K/PI4K domain-containing protein.
    
 0.536
rpl6
50S ribosomal protein L6, chloroplastic; Binds 23S rRNA.
    
  0.528
THAPS_7036
Predicted protein.
    
 0.516
B8C9K3_THAPS
WD40-repeat protein.
    
 0.516
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.