STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPS_35342Predicted protein. (2390 aa)    
Predicted Functional Partners:
THAPS_35748
Predicted protein.
 
     0.949
THAPS_18538
Predicted protein.
 
    0.948
B8C0M7_THAPS
WD_REPEATS_REGION domain-containing protein.
  
 0.843
B8C7T8_THAPS
Platelet-activating factor acetylhydrolase beta subunit-like protein.
    
 0.843
DIC2
Outer dynein arm intermediate chain subunit-like protein.
  
 0.838
B8CCB9_THAPS
CAP-Gly domain-containing protein.
   
 0.776
B8C2U5_THAPS
Uncharacterized protein.
  
 
 0.762
TUB3
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
 
  
 0.740
TUB2
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
 
  
 0.740
B8CB32_THAPS
Uncharacterized protein.
  
 
 0.726
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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