STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD1Acyl-coa dehydrogenase. (378 aa)    
Predicted Functional Partners:
B8BYB3_THAPS
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.979
KCT1
3-ketoacyl-coa thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.976
KCT2
3-ketoacyl-coa thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.976
THAPS_269199
Predicted protein.
  
 0.975
B8C2B7_THAPS
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.975
AAT1_1
Acetyl-coa acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.962
B8LDA6_THAPS
3-hyroxyacyl CoA dehydrogenase.
 0.961
PCC1
Propionyl-coa carboxylase.
 
 
 0.960
B8C9J4_THAPS
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.959
ACS2_2
Acetyl-coenzyme A synthetase.
 
 
 0.941
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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