STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BQZ8_THAPS2Fe-2S ferredoxin-type domain-containing protein. (275 aa)    
Predicted Functional Partners:
THAPSDRAFT_735
NADH dehydrogenase.
  
 
 0.853
B8C955_THAPS
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
  
 
 0.825
psaD
Photosystem I ferredoxin-binding protein.
   
 
 0.808
THAPS_10895
NADP-dependent ferredoxin reductase and adrenodoxin reductase, fprA-like protein.
   
 0.807
Lhcr8
Fucoxanthin chl a/c light-harvesting protein.
   
 
 0.801
B8C7U0_THAPS
NifU like N terminal domain, iron; Belongs to the NifU family.
  
 0.759
psaF
Photosystem I protein F.
   
 
 0.742
PSAF
PSAF, photosystem I reaction center subunit.
   
 
 0.742
B8C839_THAPS
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.702
B8BQT3_THAPS
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
  
 0.697
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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